Generate Multiscale Basic Features with Scikit-Image

Compute multiscale basic features of a mrc or zarr tomogram and save them in a Zarr.

Arguments

--inputfile

Path to the input MRC file or zarr path containing the tomogram (default value: PARAMETER_VALUE)

--outputdirectory

Path for the output directory to save the Zarr file (default value: PARAMETER_VALUE)

--intensity

Include intensity features (default value: 1)

--edges

Include edge features (default value: 1)

--texture

Include texture features (default value: 1)

--sigma_min

Minimum sigma for Gaussian blurring (default value: 0.5)

--sigma_max

Maximum sigma for Gaussian blurring (default value: 16.0)

Please follow this link for details on how to install and run this solution.